Biochemical production from various feedstocks

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  1. Navarro, R. R., Otsuka, Y., Matsuo, K., Sasaki, K., Sasaki, K., Hori, T., Habe, H., Nakamura, M., Nakashimada, Y., Kimbara, K., and Kato, J.: Combined simultaneous enzymatic saccharification and comminution (SESC) and anaerobic digestion for sustainable biomethane generation from wood lignocellulose and the biochemical characterization of residual sludge solid, Bioresour. Technol., 300 (2020).
  2.  Okamura, Y., Treu, L., Campanaro, S., Yamashita, S., Nakai, S., Takahashi, H., Watanabe, K., Angelidaki, I., Aki, T., Matsumura, Y., and Nakashimada, Y.: Complete genome sequence of Nitratireductor sp. strain OM-1: A lipid-producing bacterium with potential use in wastewater treatment, Biotechnology Reports, 24, e00366 (2019).
  3. Tajima, T., Tomita, K., Miyahara, H., Watanabe, K., Aki, T., Okamura, Y., Matsumura, Y., Nakashimada, Y., and Kato, J.:Efficient conversion of mannitol derived from brown seaweed to fructose for fermentation with a thraustochytrid, J. Biosci. Bioeng., 125, 180-184 (2018).
  4. Navarro, R. R., Otsuka, Y., Nojiri, M., Ishizuka, S., Nakamura, M., Shikinaka, K., Matsuo, K., Sasaki, K., Sasaki, K., Kimbara, K., Nakashimada, Y., and Kato, J.: Simultaneous enzymatic saccharification and comminution for the valorization of lignocellulosic biomass toward natural products, BMC Biotechnology, 18, 1-11 (2018).
  5. Miura, T., Kita, A., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Improved methanization and microbial diversity during batch mode cultivation with repetition of substrate addition using defined organic matter and marine sediment inoculum at seawater salinity, Bioresour. Technol., 245, 833-840 (2017).
  6. Okamura, Y., Nakai, S., Ohkawachi, M., Suemitsu, M., Takahashi, H., Aki, T., Matsumura, Y., Tajima, T., Nakashimada, Y., and Matsumoto, M.: Isolation and characterization of bacterium producing lipid from short-chain fatty acids, Bioresour. Technol., 201, 215-221 (2016).
  7. Miura, T., Kita, A., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Semi-continuous methane production from undiluted brown algae using a halophilic marine microbial community, Bioresour. Technol., 200, 616–623 (2016).
  8. Kita, A., Suehira, K., Miura, T., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Nishio, N., and Nakashimada, Y.:Characterization of a halotolerant acetoclastic methanogen highly enriched from marine sediment and its application in removal of acetate, J. Biosci. Bioeng., 121, 196–202 (2016).
  9. Kita, A., Miura, T., Kawata, S., Yamaguchi, T., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., Nishio, N., and Nakashimada, Y.: Bacterial community structure and predicted alginate metabolic pathway in an alginate-degrading bacterial consortium, J. Biosci. Bioeng., 121, 286-292 (2016).
  10. Kita, A., Kobayashi, K., Miura, T., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Nishio, N., and Nakashimada, Y.: High-rate fermentation of acetate to methane under saline condition by aceticlastic methanogens immobilized in marine sediment, Journal of the Japan Petroleum Institute, 59, 9-15 (2016).
  11. Abouelenien, F., Namba, Y., Nishio, N., and Nakashimada, Y.: Dry co-digestion of poultry manure with agriculture wastes, Appl. Biochem. Biotechnol., 178, 932-946 (2016).
  12. Miura, T., Kita, A., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Improved methane production from brown algae under high salinity by fed-batch acclimation, Bioresour. Technol., 187, 275–281 (2015).
  13. Miura, T., Kita, A., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Effect of salinity on methanogenic propionate degradation by acclimated marine sediment-derived culture, Appl. Biochem. Biotechnol., 177, 1541-1552 (2015).
  14. Kita, A., Miura, T., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Dysgonomonas alginatilytica sp nov., an alginate-degrading bacterium isolated from a microbial consortium, Int. J. Syst. Evol. Microbiol., 65, 3570-3575 (2015).
  15. Miura, T., Kita, A., Okamura, Y., Aki, T., Matsumura, Y., Tajima, T., Kato, J., and Nakashimada, Y.: Evaluation of marine sediments as microbial sources for methane production from brown algae under high salinity, Bioresour. Technol., 169, 362-366 (2014).
  16. Abouelenien, F., Namba, Y., Kosseva, M. R., Nishio, N., and Nakashimada, Y.: Enhancement of methane production from co-digestion of chicken manure with agricultural wastes, Bioresour. Technol., 159, 80-87 (2014).
  17. Zhou, S., Iino, H., Nakashimada, Y., and Hosomi, M.: Evaluation of anaerobic biodegradability of forage rice straw fertilized with livestock waste, Water Sci. Technol., 66, 438-444 (2012).
  18. Yabu, H., Sakai, C., Fujiwara, T., Nishio, N., and Nakashimada, Y.: Thermophilic two-stage dry anaerobic digestion of model garbage with ammonia stripping, J. Biosci. Bioeng., 111, 312-319 (2011).
  19. Abouelenien, F., Fujiwara, W., Namba, Y., Kosseva, M., Nishio, N., and Nakashimada, Y.: Improved methane fermentation of chicken manure via ammonia removal by biogas recycle, Bioresour. Technol., 101, 6368-6373 (2010).
  20. Abouelenien, F., Nakashimada, Y., and Nishio, N.: Dry mesophilic fermentation of chicken manure for production of methane by repeated batch culture, J. Biosci. Bioeng., 107, 293-295 (2009).
  21. Abouelenien, F., Kitamura, Y., Nishio, N., and Nakashimada, Y.: Dry anaerobic ammonia-methane production from chicken manure, Appl. Microbiol. Biotechnol., 82, 757-764 (2009).
  22. Nakashimada, Y., Ohshima, Y., Minami, H., Yabu, H., Namba, Y., and Nishio, N.: Ammonia-methane two-stage anaerobic digestion of dehydrated waste-activated sludge, Appl. Microbiol. Biotechnol., 79, 1061-1069 (2008).
  23. Ito, T., Nakashimada, Y., Senba, K., Matsui, T., and Nishio, N.: Hydrogen and ethanol production from glycerol-containing wastes discharged after biodiesel manufacturing process, J. Biosci. Bioeng., 100, 260-265 (2005).
  24. Nagal, H., Kobayashi, M., Tsuji, Y., Nakashimada, Y., Kakizono, T., and Nishio, N.: Biological and chemical treatment of solid waste from soy sauce manufacture, Water Sci. Technol., 45, 335-338 (2002).
  25. Takeno, K., Nakashimada, Y., Kakizono, T., and Nishio, N.: Methane fermentation of coastal mud sediment by a two-stage upflow anaerobic sludge blanket (UASB) reactor system., Appl. Microbiol. Biotechnol., 56, 280-285 (2001).
  26. Srinivasan, K., Murakami, M., Nakashimada, Y., and Nishio, N.: Efficient production of cellulolytic and xylanolytic enzymes by the rumen anaerobic fungus, Neocallimastix frontalis, in a repeated batch culture, J. Biosci. Bioeng., 91, 153-158 (2001).
  27. Nakashimada, Y., Srinivasan, K., Murakami, M., and Nishio, N.: Direct conversion of cellulose to methane by anaerobic fungus Neocallimastix frontalis and defined methanogens, Biotechnol. Lett, 22, 223-227 (2000).